Transcript: lnc-DCLRE1B-12:4

Basic information

LNCipedia transcript ID: lnc-DCLRE1B-12:4 
LNCipedia gene ID: lnc-DCLRE1B-12
Location (hg38): chr1:113812615-113870158
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1273 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000231128.1|HBMT00000025470.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -170.3674 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DCLRE1B-12:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 AP4B1-AS1:8
5.0 AP4B1-AS1:8
5.1 lnc-DCLRE1B-11:4
5.2 lnc-DCLRE1B-12:4