Transcript: lnc-DCLRE1C-1:7

Basic information

LNCipedia transcript ID: lnc-DCLRE1C-1:7 
LNCipedia gene ID: lnc-DCLRE1C-1
Location (hg38): chr10:14865456-14878636
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1303 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272853.1|ENCT00000052942.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 404.086 coding 
CPAT coding probability 15.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DCLRE1C-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DCLRE1C-1:7
5.0 lnc-DCLRE1C-1:7
5.1 lnc-KLF6-169:5
5.2 lnc-DCLRE1C-1:7