Transcript: lnc-DDX56-1:1

Basic information

LNCipedia transcript ID: lnc-DDX56-1:1 
LNCipedia gene ID: lnc-DDX56-1
Location (hg38): chr7:44579904-44582210
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1950 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT120386
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 2027.0304 coding 
CPAT coding probability 4.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DDX56-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DDX56-1:1
4.0 lnc-DDX56-1:1
4.1 lnc-DDX56-1:1
5.0 lnc-DDX56-1:1
5.1 lnc-TNS3-37:1
5.2 lnc-DDX56-1:1