Transcript: lnc-DENND3-6:3

Basic information

LNCipedia transcript ID: lnc-DENND3-6:3 
LNCipedia gene ID: lnc-DENND3-6
Location (hg38): chr8:141001446-141003756
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1100 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000101220.1|MICT00000352574.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.9368 non-coding 
CPAT coding probability 5.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DENND3-6:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DENND3-4:3
5.0 lnc-DENND3-4:3
5.1 lnc-GPT-99:3
5.2 lnc-DENND3-6:3