Transcript: lnc-DEPP1-2:5

Basic information

LNCipedia transcript ID: lnc-DEPP1-2:5 
LNCipedia gene ID: lnc-DEPP1-2
Location (hg38): chr10:45100117-45146944
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 758 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT013078
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.9875 non-coding 
CPAT coding probability 5.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DEPP1-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf25-2:5
4.0 lnc-C10orf25-2:5
4.1 lnc-C10orf25-2:5
5.0 lnc-C10orf25-2:5
5.1 lnc-LRRC18-74:5
5.2 lnc-DEPP1-2:5