Transcript: lnc-DEPP1-2:9

Basic information

LNCipedia transcript ID: lnc-DEPP1-2:9 
LNCipedia gene ID: lnc-DEPP1-2
Location (hg38): chr10:45075884-45126329
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 719 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT013072
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.1827 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DEPP1-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf25-2:9
4.0 lnc-C10orf25-2:9
4.1 lnc-C10orf25-2:9
5.0 lnc-C10orf25-2:9
5.1 lnc-LRRC18-74:9
5.2 lnc-DEPP1-2:9