Transcript: lnc-DERA-7:1

Basic information

LNCipedia transcript ID: lnc-DERA-7:1 
LNCipedia gene ID: lnc-DERA-7
Location (hg38): chr12:16466286-16479240
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 12811 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT027146; FPKM1_group_5834_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.8261 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DERA-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DERA-7:1
4.0 lnc-DERA-7:1
4.1 lnc-DERA-7:1
5.0 lnc-DERA-7:1
5.1 lnc-BCL2L14-74:1
5.2 lnc-DERA-7:1