Transcript: lnc-DERL1-4:2

Basic information

LNCipedia transcript ID: lnc-DERL1-4:2 
LNCipedia gene ID: lnc-DERL1-4
Location (hg38): chr8:122701088-122733994
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2746 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00015154; NONHSAT128497
Alternative gene names: XLOC_007199; linc-HAS2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.2239 non-coding 
CPAT coding probability 0.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DERL1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-973F15.1.1-2:1
3.1 lnc-RP11-973F15.1.1-1:1
4.0 lnc-RP11-973F15.1.1-1:1
4.1 lnc-RP11-973F15.1.1-1:1
5.0 lnc-RP11-973F15.1.1-1:1
5.1 lnc-WASHC5-47:2
5.2 lnc-DERL1-4:2