Transcript: lnc-DERL1-4:3

Basic information

LNCipedia transcript ID: lnc-DERL1-4:3 
LNCipedia gene ID: lnc-DERL1-4
Ensembl Gene ID: ENSG00000263443
Ensembl Transcript ID: ENST00000577765
Location (hg38): chr8:122700269-122703423
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 501 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577765.1; RP11-973F15.2-001; OTTHUMT00000447085.1; NONHSAT128496
Alternative gene names: ENSG00000263443.1; RP11-973F15.2; OTTHUMG00000179558.1; AC100872.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 8.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DERL1-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-973F15.1.1-1:2
4.0 lnc-RP11-973F15.1.1-1:2
4.1 lnc-RP11-973F15.1.1-1:2
5.0 lnc-RP11-973F15.1.1-1:2
5.1 lnc-WASHC5-47:3
5.2 lnc-DERL1-4:3