Transcript: lnc-DERL3-6:1

Basic information

LNCipedia transcript ID: lnc-DERL3-6:1 
LNCipedia gene ID: lnc-DERL3-6
Ensembl Gene ID: ENSG00000279467
Ensembl Transcript ID: ENST00000624923
Location (hg38): chr22:23865248-23873277
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8030 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624923.1
Alternative gene names: ENSG00000279467.1; KB-1125A3.12; AP000350.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 117.6611 coding 
CPAT coding probability 3.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DERL3-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AP000350.4.1-6:1
4.1 lnc-AP000350.4.1-6:1
5.0 lnc-AP000350.4.1-6:1
5.1 lnc-SCARF2-70:1
5.2 lnc-DERL3-6:1