Transcript: lnc-DET1-1:15

Basic information

LNCipedia transcript ID: lnc-DET1-1:15 
LNCipedia gene ID: lnc-DET1-1
Location (hg38): chr15:88494440-88512529
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 671 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000606219.1
Alternative gene names: ENSG00000173867.8; RP11-97O12.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.9861 non-coding 
CPAT coding probability 24.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DET1-1:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DET1-1:4
4.0 lnc-MRPL46.1-1:2
4.1 lnc-MRPL46.1-1:2
5.0 lnc-MRPL46.1-1:2
5.1 lnc-DET1-1:8
5.2 lnc-DET1-1:15