Transcript: lnc-DFFA-1:2

Basic information

LNCipedia transcript ID: lnc-DFFA-1:2 
LNCipedia gene ID: lnc-DFFA-1
Location (hg38): chr1:10429881-10430669
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 789 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271989.1|ENST00000607572.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -120.6707 non-coding 
CPAT coding probability 5.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DFFA-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DFFA-1:2
5.0 lnc-DFFA-1:2
5.1 lnc-LZIC-6:2
5.2 lnc-DFFA-1:2