Transcript: lnc-DGCR6-43:1

Basic information

LNCipedia transcript ID: lnc-DGCR6-43:1 
LNCipedia gene ID: lnc-DGCR6-43
Ensembl Gene ID: ENSG00000284294
Ensembl Transcript ID: ENST00000623496
Location (hg38): chr22:18945123-18946971
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 228 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623496.1
Alternative gene names: ENSG00000284294.1; AC007326.5; AC007326.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.486 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DGCR6-43:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SERPIND1-43:4
5.1 lnc-SERPIND1-43:4
5.2 lnc-DGCR6-43:1