Transcript: lnc-DHRS12-2:1

Basic information

LNCipedia transcript ID: lnc-DHRS12-2:1 
LNCipedia gene ID: lnc-DHRS12-2
Location (hg38): chr13:51620913-51623222
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 411 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000413571.1; WDFY2-AS1-001; OTTHUMT00000045032.1; NONHSAT033940
Alternative gene names: ENSG00000226830.1; WDFY2-AS1; OTTHUMG00000016949.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.0547 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHRS12-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHRS12-2:1
4.0 lnc-DHRS12-2:1
4.1 lnc-DHRS12-2:1
5.0 lnc-DHRS12-2:1
5.1 lnc-CCDC169-181:1
5.2 lnc-DHRS12-2:1