Transcript: lnc-DHRS7-1:5

Basic information

LNCipedia transcript ID: lnc-DHRS7-1:5 
LNCipedia gene ID: lnc-DHRS7-1
Ensembl Gene ID: ENSG00000254718
Ensembl Transcript ID: ENST00000553775
Location (hg38): chr14:60240142-60245568
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 445 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553775.1; CTD-2184C24.2-004; OTTHUMT00000415184.1
Alternative gene names: ENSG00000254718.2; CTD-2184C24.2; OTTHUMG00000166150.2; ENSG00000254718.6; AL157756.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.8978 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHRS7-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHRS7-1:5
4.0 lnc-DHRS7-1:5
4.1 lnc-DHRS7-1:5
5.0 lnc-DHRS7-1:5
5.1 lnc-DHRS7-1:5
5.2 lnc-DHRS7-1:5