Transcript: lnc-DHX34-4:2

Basic information

LNCipedia transcript ID: lnc-DHX34-4:2 
LNCipedia gene ID: lnc-DHX34-4
Location (hg38): chr19:47484298-47485018
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 721 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000268061.1|HBMT00000713966.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.68 non-coding 
CPAT coding probability 3.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX34-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NAPA-AS1:6
5.0 NAPA-AS1:6
5.1 lnc-BICRA-38:2
5.2 lnc-DHX34-4:2