Transcript: lnc-DHX38-27:5

Basic information

LNCipedia transcript ID: lnc-DHX38-27:5 
LNCipedia gene ID: lnc-DHX38-27
Location (hg38): chr16:72745401-72747502
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 707 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT143601; FPKM1_group_11878_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -243.5334 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX38-27:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHX38-4:2
4.0 lnc-DHX38-4:2
4.1 lnc-DHX38-4:2
5.0 lnc-DHX38-4:2
5.1 lnc-MARVELD3-101:5
5.2 lnc-DHX38-27:5