Transcript: lnc-DHX38-29:2

Basic information

LNCipedia transcript ID: lnc-DHX38-29:2 
LNCipedia gene ID: lnc-DHX38-29
Location (hg38): chr16:73048234-73051308
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2548 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271009.2|MICT00000136006.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -19.434 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX38-29:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-44L9.1.1-14:2
5.0 lnc-RP11-44L9.1.1-14:2
5.1 lnc-MARVELD3-39:2
5.2 lnc-DHX38-29:2