Transcript: lnc-DHX38-3:10

Basic information

LNCipedia transcript ID: lnc-DHX38-3:10 
LNCipedia gene ID: lnc-DHX38-3
Location (hg38): chr16:72425946-72431713
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5768 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260664.1|FTMT26400004222.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.5701 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX38-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DHX38-3:10
5.0 lnc-DHX38-3:10
5.1 lnc-MARVELD3-30:3
5.2 lnc-DHX38-3:10