Transcript: lnc-DHX38-41:1

Basic information

LNCipedia transcript ID: lnc-DHX38-41:1 
LNCipedia gene ID: lnc-DHX38-41
Ensembl Gene ID: ENSG00000284675
Ensembl Transcript ID: ENST00000641075
Location (hg38): chr16:73123296-73137580
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 823 bp
Exons: 4
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641075.1
Alternative gene names: ENSG00000284675.1; AC116667.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -75.6546 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DHX38-41:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MARVELD3-41:1
5.1 lnc-MARVELD3-41:1
5.2 lnc-DHX38-41:1