Transcript: lnc-DIAPH3-9:1

Basic information

LNCipedia transcript ID: lnc-DIAPH3-9:1 
LNCipedia gene ID: lnc-DIAPH3-9
Location (hg38): chr13:59514375-59516943
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 945 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_858_chr13:60088508-60091077_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.7305 non-coding 
CPAT coding probability 3.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DIAPH3-9:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DIAPH3-9:1
4.0 lnc-DIAPH3-9:1
4.1 lnc-DIAPH3-9:1
5.0 lnc-DIAPH3-9:1
5.1 lnc-CCDC169-221:1
5.2 lnc-DIAPH3-9:1