Transcript: lnc-DIO2-2:1

Basic information

LNCipedia transcript ID: lnc-DIO2-2:1 
LNCipedia gene ID: lnc-DIO2-2
Ensembl Gene ID: ENSG00000258637
Ensembl Transcript ID: ENST00000553322
Location (hg38): chr14:79661666-79791263
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 394 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000553322.1; RP11-242P2.1-001; OTTHUMT00000413840.1; NONHSAT038026
Alternative gene names: ENSG00000258637.1; RP11-242P2.1; OTTHUMG00000171519.1; AC008056.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -213.5764 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DIO2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DIO2-2:1
4.0 lnc-DIO2-2:1
4.1 lnc-DIO2-2:1
5.0 lnc-DIO2-2:1
5.1 lnc-PROX2-64:1
5.2 lnc-DIO2-2:1