Transcript: lnc-DIO3-4:1

Basic information

LNCipedia transcript ID: lnc-DIO3-4:1 
LNCipedia gene ID: lnc-DIO3-4
Ensembl Gene ID: ENSG00000258497
Ensembl Transcript ID: ENST00000555328
Location (hg38): chr14:101257332-101278318
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2490 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000510232; TCONS_00022403; ENST00000555328; ENST00000555328.1; CTD-2561F5.1-001; OTTHUMT00000414690.1; NONHSAT040014
Alternative gene names: ENSG00000249733; XLOC_010936; linc-DIO3-4; ENSG00000258497; CTD-2561F5.1; ENSG00000258497.1; OTTHUMG00000171674.1; AL359682.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.7306 non-coding 
CPAT coding probability 6.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DIO3-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DIO3.1-4:1
3.1 lnc-DIO3.1-4:1
4.0 lnc-DIO3.1-4:1
4.1 lnc-DIO3.1-4:1
5.0 lnc-DIO3.1-4:1
5.1 lnc-TECPR2-17:1
5.2 lnc-DIO3-4:1