Transcript: lnc-DLX2-4:6

Basic information

LNCipedia transcript ID: lnc-DLX2-4:6 
LNCipedia gene ID: lnc-DLX2-4
Location (hg38): chr2:172552615-172556440
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 446 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225205.1|ENST00000444919.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 48.6638 non-coding 
CPAT coding probability 6.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DLX2-4:6 yes no no no

Available literature

  1. Li (2015), Construction and analysis of lncRNA-lncRNA synergistic networks to reveal clinically relevant lncRNAs in cancer., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DLX2-4:6
5.0 lnc-DLX2-4:6
5.1 lnc-OLA1-31:10
5.2 lnc-DLX2-4:6