Transcript: lnc-DMRTA1-7:5

Basic information

LNCipedia transcript ID: lnc-DMRTA1-7:5 
LNCipedia gene ID: lnc-DMRTA1-7
Location (hg38): chr9:24561327-24592083
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 585 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016546; NONHSAT130495
Alternative gene names: XLOC_007304; linc-IFT74-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -229.7867 non-coding 
CPAT coding probability 0.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DMRTA1-7:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DMRTA1-5:5
3.1 lnc-DMRTA1-7:5
4.0 lnc-DMRTA1-7:5
4.1 lnc-DMRTA1-7:5
5.0 lnc-DMRTA1-7:5
5.1 lnc-RECK-113:7
5.2 lnc-DMRTA1-7:5