Transcript: lnc-DNAAF5-2:1

Basic information

LNCipedia transcript ID: lnc-DNAAF5-2:1 
LNCipedia gene ID: lnc-DNAAF5-2
Location (hg38): chr7:561837-566133
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1207 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT118647
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.2533 non-coding 
CPAT coding probability 16.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAAF5-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HEATR2-2:2
4.0 lnc-HEATR2-2:2
4.1 lnc-HEATR2-2:2
5.0 lnc-HEATR2-2:2
5.1 lnc-GPER1-26:1
5.2 lnc-DNAAF5-2:1