Transcript: lnc-DNAAF5-3:12

Basic information

LNCipedia transcript ID: lnc-DNAAF5-3:12 
LNCipedia gene ID: lnc-DNAAF5-3
Location (hg38): chr7:519980-530311
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6134 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223855.1|MICT00000316973.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.2492 non-coding 
CPAT coding probability 5.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAAF5-3:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HEATR2-3:23
5.0 lnc-HEATR2-3:23
5.1 lnc-GPER1-29:12
5.2 lnc-DNAAF5-3:12