Transcript: lnc-DNAAF5-3:23

Basic information

LNCipedia transcript ID: lnc-DNAAF5-3:23 
LNCipedia gene ID: lnc-DNAAF5-3
Location (hg38): chr7:523518-525230
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1713 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1804:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.2492 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAAF5-3:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-HEATR2-3:12
4.1 lnc-HEATR2-3:12
5.0 lnc-HEATR2-3:12
5.1 lnc-GPER1-29:23
5.2 lnc-DNAAF5-3:23