Transcript: lnc-DNAH8-2:11

Basic information

LNCipedia transcript ID: lnc-DNAH8-2:11 
LNCipedia gene ID: lnc-DNAH8-2
Location (hg38): chr6:38665947-38667382
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1436 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT112325; FPKM1_group_27538_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
WGMHSMIERSLHNHMK 95% antisense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.714 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DNAH8-2:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAH8-6:1
4.0 lnc-DNAH8-6:1
4.1 lnc-DNAH8-2:11
5.0 lnc-DNAH8-2:11
5.1 lnc-PI16-52:11
5.2 lnc-DNAH8-2:11