Transcript: lnc-DNAJB12-3:1

Basic information

LNCipedia transcript ID: lnc-DNAJB12-3:1 
LNCipedia gene ID: lnc-DNAJB12-3
Location (hg38): chr10:72477174-72508625
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 554 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT013922
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.4314 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJB12-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAJB12-3:1
4.0 lnc-DNAJB12-3:1
4.1 lnc-DNAJB12-3:1
5.0 lnc-DNAJB12-3:1
5.1 lnc-VSIR-12:1
5.2 lnc-DNAJB12-3:1