Transcript: lnc-DNAJB6-7:5

Basic information

LNCipedia transcript ID: lnc-DNAJB6-7:5 
LNCipedia gene ID: lnc-DNAJB6-7
Location (hg38): chr7:157513259-157516841
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 619 bp
Exons: 4
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT124502; FPKM1_group_30737_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 31.0228 non-coding 
CPAT coding probability 7.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJB6-7:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC006372.1-1:7
4.0 lnc-AC006372.1-1:7
4.1 lnc-AC006372.1-1:7
5.0 lnc-AC006372.1-1:7
5.1 lnc-RNF32-32:5
5.2 lnc-DNAJB6-7:5