Transcript: lnc-DNAJB6-7:7

Basic information

LNCipedia transcript ID: lnc-DNAJB6-7:7 
LNCipedia gene ID: lnc-DNAJB6-7
Ensembl Gene ID: ENSG00000233191
Ensembl Transcript ID: ENST00000433660
Location (hg38): chr7:157513294-157516841
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 292 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00013106; ENST00000433660.1; AC006372.6-001; OTTHUMT00000327100.1; NONHSAT124504
Alternative gene names: XLOC_006316; linc-WDR60-3; ENSG00000233191.1; AC006372.6; OTTHUMG00000152640.1; AC006372.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.8788 non-coding 
CPAT coding probability 8.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJB6-7:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC006372.1-1:5
3.1 lnc-AC006372.1-1:5
4.0 lnc-AC006372.1-1:5
4.1 lnc-AC006372.1-1:5
5.0 lnc-AC006372.1-1:5
5.1 lnc-RNF32-32:7
5.2 lnc-DNAJB6-7:7