Transcript: lnc-DNAJB9-1:2

Basic information

LNCipedia transcript ID: lnc-DNAJB9-1:2 
LNCipedia gene ID: lnc-DNAJB9-1
Location (hg38): chr7:108598375-108615383
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1502 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225647.1|MICT00000331084.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.2445 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJB9-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DNAJB9-1:2
5.0 lnc-DNAJB9-1:2
5.1 lnc-KMT2E-54:3
5.2 lnc-DNAJB9-1:2