Transcript: lnc-DNAJC19-5:6

Basic information

LNCipedia transcript ID: lnc-DNAJC19-5:6 
LNCipedia gene ID: lnc-DNAJC19-5
Location (hg38): chr3:180983710-180989774
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1247 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT093459; NR_046073
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 192.6047 coding 
CPAT coding probability 9.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DNAJC19-5:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAJC19-5:6
4.0 lnc-DNAJC19-5:6
4.1 lnc-DNAJC19-5:6
5.0 lnc-DNAJC19-5:6
5.1 lnc-CCDC39-5:1
5.2 lnc-DNAJC19-5:6