Transcript: lnc-DNAJC8-1:10

Basic information

LNCipedia transcript ID: lnc-DNAJC8-1:10 
LNCipedia gene ID: lnc-DNAJC8-1
Location (hg38): chr1:28239511-28247214
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2356 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270605.1|FTMT20100026094.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -54.0888 non-coding 
CPAT coding probability 8.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJC8-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DNAJC8-1:10
5.0 lnc-DNAJC8-1:10
5.1 lnc-DNAJC8-1:10
5.2 lnc-DNAJC8-1:10