Transcript: lnc-DNAJC8-1:5

Basic information

LNCipedia transcript ID: lnc-DNAJC8-1:5 
LNCipedia gene ID: lnc-DNAJC8-1
Ensembl Gene ID: ENSG00000270605
Ensembl Transcript ID: ENST00000604716
Location (hg38): chr1:28239509-28241453
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1945 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT001943; ENST00000604716.1
Alternative gene names: ENSG00000270605.1; RP5-1092A3.4; AL353622.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.0888 non-coding 
CPAT coding probability 9.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNAJC8-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAJC8-1:5
4.0 lnc-DNAJC8-1:5
4.1 lnc-DNAJC8-1:5
5.0 lnc-DNAJC8-1:5
5.1 lnc-DNAJC8-1:5
5.2 lnc-DNAJC8-1:5