Transcript: lnc-DNASE1L1-2:4

Basic information

LNCipedia transcript ID: lnc-DNASE1L1-2:4 
LNCipedia gene ID: lnc-DNASE1L1-2
Location (hg38): chrX:154424380-154429083
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1202 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1479:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.0982 non-coding 
CPAT coding probability 99.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DNASE1L1-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-DNASE1L1-2:4
4.1 lnc-DNASE1L1-2:4
5.0 lnc-DNASE1L1-2:4
5.1 lnc-CTAG1B-8:1
5.2 lnc-DNASE1L1-2:4