Transcript: lnc-DNASE1L2-1:1

Basic information

LNCipedia transcript ID: lnc-DNASE1L2-1:1 
LNCipedia gene ID: lnc-DNASE1L2-1
Ensembl Gene ID: ENSG00000261663
Ensembl Transcript ID: ENST00000565709
Location (hg38): chr16:2240487-2241818
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 788 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565709.1; RP11-304L19.11-001; OTTHUMT00000435248.1; NONHSAT052085
Alternative gene names: ENSG00000261663.1; RP11-304L19.11; OTTHUMG00000177087.1; AC009065.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.4028 non-coding 
CPAT coding probability 2.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNASE1L2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNASE1L2-1:1
4.0 lnc-DNASE1L2-1:1
4.1 lnc-DNASE1L2-1:1
5.0 lnc-DNASE1L2-1:1
5.1 lnc-DNASE1L2-1:1
5.2 lnc-DNASE1L2-1:1