Transcript: lnc-DNASE1L3-2:1

Basic information

LNCipedia transcript ID: lnc-DNASE1L3-2:1 
LNCipedia gene ID: lnc-DNASE1L3-2
Location (hg38): chr3:58292266-58294724
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2073 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000511761
Alternative gene names: ENSG00000248224


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 95.5778 coding 
CPAT coding probability 9.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-DNASE1L3-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DNASE1L3-1:1
3.1 lnc-DNASE1L3-2:1
4.0 lnc-DNASE1L3-2:1
4.1 lnc-DNASE1L3-2:1
5.0 lnc-DNASE1L3-2:1
5.1 lnc-DENND6A-9:1
5.2 lnc-DNASE1L3-2:1