Transcript: lnc-DNMT3B-6:1

Basic information

LNCipedia transcript ID: lnc-DNMT3B-6:1 
LNCipedia gene ID: lnc-DNMT3B-6
Location (hg38): chr20:32657270-32674127
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1203 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT079367
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.9511 non-coding 
CPAT coding probability 2.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DNMT3B-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-410N8.4.1-6:1
4.0 lnc-RP11-410N8.4.1-6:1
4.1 lnc-RP11-410N8.4.1-6:1
5.0 lnc-RP11-410N8.4.1-6:1
5.1 lnc-BPIFB2-6:1
5.2 lnc-DNMT3B-6:1