Transcript: lnc-DPH1-1:3

Basic information

LNCipedia transcript ID: lnc-DPH1-1:3 
LNCipedia gene ID: lnc-DPH1-1
RefSeq ID: NR_135642
Location (hg38): chr17:2017716-2020706
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1914 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135642.1
Alternative gene names: LOC105371485


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -97.0672 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DPH1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-RPA1-5:2
5.1 lnc-RPA1-5:2
5.2 lnc-DPH1-1:3