Transcript: lnc-DPH5-1:1

Basic information

LNCipedia transcript ID: lnc-DPH5-1:1 
LNCipedia gene ID: lnc-DPH5-1
Ensembl Gene ID: ENSG00000225938
Ensembl Transcript ID: ENST00000432195
Location (hg38): chr1:101235683-101236528
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 403 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000589; ENST00000432195.1; RP4-575N6.4-001; OTTHUMT00000030146.1
Alternative gene names: XLOC_000942; linc-DPH5; ENSG00000225938.1; RP4-575N6.4; OTTHUMG00000010942.1; AL109741.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 18.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DPH5-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DPH5-1:1
3.1 lnc-DPH5-1:1
4.0 lnc-DPH5-1:1
4.1 lnc-DPH5-1:1
5.0 lnc-DPH5-1:1
5.1 lnc-EXTL2-1:12
5.2 lnc-DPH5-1:1