Transcript: lnc-DPP4-1:2

Basic information

LNCipedia transcript ID: lnc-DPP4-1:2 
LNCipedia gene ID: lnc-DPP4-1
Ensembl Gene ID: ENSG00000224076
Ensembl Transcript ID: ENST00000444164
Location (hg38): chr2:161422659-161423135
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 403 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000444164.1; AC009487.4-002; OTTHUMT00000332840.1; NONHSAT075180; ENST00000444164.5
Alternative gene names: ENSG00000224076.1; AC009487.4; OTTHUMG00000153883.1; ENSG00000224076.5; AC009487.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.4707 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DPP4-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DPP4-1:2
4.0 lnc-DPP4-1:2
4.1 lnc-DPP4-1:2
5.0 lnc-DPP4-1:2
5.1 lnc-SCN9A-44:3
5.2 lnc-DPP4-1:2