Transcript: lnc-DPY19L1-2:1

Basic information

LNCipedia transcript ID: lnc-DPY19L1-2:1 
LNCipedia gene ID: lnc-DPY19L1-2
Location (hg38): chr7:34685387-34800854
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1532 bp
Exons: 6
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003tek_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.7036 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DPY19L1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC005493.1-2:1
4.0 lnc-AC005493.1-2:1
4.1 lnc-AC005493.1-2:1
5.0 lnc-AC005493.1-2:1
5.1 lnc-LSM5-21:1
5.2 lnc-DPY19L1-2:1