Transcript: lnc-DRC3-1:1

Basic information

LNCipedia transcript ID: lnc-DRC3-1:1 
LNCipedia gene ID: lnc-DRC3-1
Ensembl Gene ID: ENSG00000264167
Ensembl Transcript ID: ENST00000583598
Location (hg38): chr17:17777781-17779094
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 466 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000583598.1; RP1-253P7.1-001; OTTHUMT00000442885.1; NONHSAT146104
Alternative gene names: ENSG00000264167.1; RP1-253P7.1; OTTHUMG00000178675.1; AC122129.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.61 non-coding 
CPAT coding probability 5.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DRC3-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC48-1:1
4.0 lnc-LRRC48-1:1
4.1 lnc-LRRC48-1:1
5.0 lnc-LRRC48-1:1
5.1 lnc-GLP2R-108:1
5.2 lnc-DRC3-1:1