Transcript: lnc-DRD2-3:2

Basic information

LNCipedia transcript ID: lnc-DRD2-3:2 
LNCipedia gene ID: lnc-DRD2-3
Ensembl Gene ID: ENSG00000247416
Ensembl Transcript ID: ENST00000532002
Location (hg38): chr11:112960327-112961299
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 566 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000532002; ENST00000532002.1; RP11-629G13.1-002; OTTHUMT00000395470.1; NONHSAT024228
Alternative gene names: ENSG00000247416; RP11-629G13.1; ENSG00000247416.2; OTTHUMG00000167662.1; AP000802.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -152.3823 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DRD2-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DRD2-1:2
3.1 lnc-DRD2-3:2
4.0 lnc-DRD2-3:2
4.1 lnc-DRD2-3:2
5.0 lnc-DRD2-3:2
5.1 lnc-DRD2-11:4
5.2 lnc-DRD2-3:2