Transcript: lnc-DRD5-10:11

Basic information

LNCipedia transcript ID: lnc-DRD5-10:11 
LNCipedia gene ID: lnc-DRD5-10
Location (hg38): chr4:11722451-11802418
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 678 bp
Exons: 5
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00007474; ENST00000515286; ENST00000515286.1; RP11-281P23.2-001; OTTHUMT00000358989.1; NONHSAT095541
Alternative gene names: XLOC_003457; linc-CPEB2-10; ENSG00000249631; RP11-281P23.2; ENSG00000249631.1; OTTHUMG00000160044.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.0708 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DRD5-10:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DRD5-8:11
3.1 lnc-DRD5-10:11
4.0 lnc-DRD5-10:11
4.1 lnc-DRD5-10:11
5.0 lnc-DRD5-10:11
5.1 lnc-USP17L28-15:21
5.2 lnc-DRD5-10:11