Transcript: lnc-DRD5-10:2

Basic information

LNCipedia transcript ID: lnc-DRD5-10:2 
LNCipedia gene ID: lnc-DRD5-10
Ensembl Gene ID: ENSG00000249631
Ensembl Transcript ID: ENST00000510095
Location (hg38): chr4:11625714-11813958
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007472; ENST00000510095; ENST00000510095.1; RP11-281P23.2-006; OTTHUMT00000359055.2; NONHSAT095531; ENST00000510095.5
Alternative gene names: XLOC_003457; linc-CPEB2-10; ENSG00000249631; RP11-281P23.2; ENSG00000249631.1; OTTHUMG00000160044.4; ENSG00000249631.5; AC005699.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -243.2706 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DRD5-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DRD5-8:2
3.1 lnc-DRD5-10:2
4.0 lnc-DRD5-10:2
4.1 lnc-DRD5-10:2
5.0 lnc-DRD5-10:2
5.1 lnc-USP17L28-15:12
5.2 lnc-DRD5-10:2