Transcript: lnc-DRD5-11:1

Basic information

LNCipedia transcript ID: lnc-DRD5-11:1 
LNCipedia gene ID: lnc-DRD5-11
Ensembl Gene ID: ENSG00000248262
Ensembl Transcript ID: ENST00000514103
Location (hg38): chr4:11914667-11919688
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 423 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007478; ENST00000514103; ENST00000514103.1; RP11-1J7.1-001; OTTHUMT00000359108.1; NONHSAT095553
Alternative gene names: XLOC_003458; linc-CPEB2-9; ENSG00000248262; RP11-1J7.1; ENSG00000248262.1; OTTHUMG00000160075.1; AC108037.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DRD5-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DRD5-9:1
3.1 lnc-DRD5-11:1
4.0 lnc-DRD5-11:1
4.1 lnc-DRD5-11:1
5.0 lnc-DRD5-11:1
5.1 lnc-USP17L28-17:1
5.2 lnc-DRD5-11:1