Transcript: lnc-DSG1-13:6

Basic information

LNCipedia transcript ID: lnc-DSG1-13:6 
LNCipedia gene ID: lnc-DSG1-13
Location (hg38): chr18:29156857-29175697
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2345 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000035469.1|ENCT00000191663.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -141.8064 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-DSG1-13:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DSG1-13:6
5.0 lnc-DSG1-13:6
5.1 lnc-RIOK3-69:4
5.2 lnc-DSG1-13:6